.venv/
00_test_llm.py
01_pdf_extraction.py
02_preprocessing.py
03_deductive_coding.py
04_theme_generation.py
05_categorization.py
06_visualization.py
07_extract_quotes.py
08_reorganize_to_4_categories.py
09_patient_level_aggregation.py
10_generate_llm_justifications.py
10_generate_llm_justifications_old-backup.py
11_calculate_accuracy_validation.py
__pycache__/
confusion_matrix_group_pct.py
generate_hierarchy_table.py
generate_report.py
hierarchy_table_output.xlsx
outputs/
report.docx
run_test_2_samples.py
utils.py